GeneTrail 3.2
Advanced high-throughput enrichment analysis
About
| Web service | URL | Source code |
| ClinOmicsTrailbc | https://clinomicstrail.bioinf.uni-sb.de | - |
|---|---|---|
| DrugTargetInspector | https://dti.bioinf.uni-sb.de | - |
| GeneTrail | https://genetrail.bioinf.uni-sb.de | C++ code for enrichment algorithms (https://github.com/unisb-bioinf/genetrail3) |
| NetworkTrail | https://networktrail.bioinf.uni-sb.de | - |
| RegulatorTrail | https://regulatortrail.bioinf.uni-sb.de | C++ code for REGGAE and further association measures (https://github.com/unisb-bioinf/genetrail3) |
ClinOmicsTrailbc
ClinOmicsTrailbc is an interactive visual analytics tool for breast cancer treatment stratification. ClinOmicsTrailbc offers rich functionality for the integration and analysis of clinical markers as well as transcriptomics and (epi-)genomics datasets with respect to a broad spectrum of biological, pharmacological, and medical knowledge. Our tool provides a comprehensive assessment of a variety of treatment options based on the tumor’s main driver mutations, the overall tumor mutational burden, activity patterns of core breast cancer-relevant pathways, drug-specific predictive biomarkers, the status of molecular drug targets and pharmacogenomic implications.
DrugTargetInspector
DrugTargetInspector (DTI) is an interactive assistance tool for treatment stratification. DTI analyzes genomic, transcriptomic and proteomic datasets and provides information on deregulated drug targets, enriched biological pathways and deregulated subnetworks, as well as mutations and their potential effects on putative drug targets and genes of interest. Please refer to our publication for further details and case studies (doi: 10.1002/ijc.29897).
GeneTrail
GeneTrail is a web-interface providing access to different tools for the statistical analysis of molecular signatures. GeneTrail allows the integrated analysis of transcriptomic, miRNomic, genomic, and proteomic datasets. It offers multiple statistical tests, a large number of predefined reference sets, as well as a comprehensive collection of biological categories and enables direct comparisons between the computed results.
NetworkTrail
NetworkTrail is a web-interface providing access to different analysis tools for regulatory networks.